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Poster session
Session topics:
- Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity | ||
Presentations | ||
ID: 564
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Maintenance on mitochondrial complexes ensures bioenergetic function in differentiated cells 1Institute for Cardiovascular Physiology, Goethe University Frankfurt, Germany; 2Molecular Bioinformatics, Goethe University, Frankfurt, Germany Bibliography
[1] H. Heide, L. Bleier, M. Steger, J. Ackermann, S. Dröse, B. Schwamb, M. Zörnig, A.S. Reichert, I. Koch, I. Wittig, U.Brandt, Complexome profiling identifies TMEM126B as a component of the mitochondrial complex I assembly complex, Cell Metab. 16 (2012) 538–549. [2] B. Schwanhäusser, M. Gossen, G. Dittmar, M. Selbach, Global analysis of cellular protein translation by pulsed SILAC, Proteomics 9 (2009) 205–209. ID: 462
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Investigating pathogenicity and tissue-specificity of mitochondrial aminoacyl-tRNA synthetase defects AARS2, EARS2 and RARS2 in neurons Department of Clinical Neurosciences, University of Cambridge, United Kingdom ID: 253
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mutations in Coq2 leads to severe developmental delay and early death in both zebrafish and mouse 1Ibs.Granada, Granada, Spain; 2Physiology Department, Biomedical Research Center, University of Granada, Granada, Spain; 3Biofisika Institute (CSIC,UPV-EHU) and Department of Biochemistry and Molecular Biology, University of Basque Country, Leioa, Spain Bibliography
1.Alcázar-Fabra, M., Rodríguez-Sánchez, F., Trevisson, E., & Brea-Calvo, G. (2021). Primary Coenzyme Q deficiencies: A literature review and online platform of clinical features to uncover genotype-phenotype correlations. Free Radical Biology and Medicine, 167, 141-180. https://doi.org/10.1016/j.freeradbiomed.2021.02.046 2.Mutations in COQ2 in Familial and Sporadic Multiple-System Atrophy. (2013). New England Journal of Medicine, 369(3), 233-244. https://doi.org/10.1056/nejmoa1212115 3.Jakobs, B. S., Van Den Heuvel, L. P., Smeets, R., De Vries, M., Hien, S., Schaible, T., Smeitink, J. A., Wevers, R. A., Wortmann, S. B., & Rodenburg, R. J. (2013). A novel mutation in COQ2 leading to fatal infantile multisystem disease. Journal of the Neurological Sciences, 326(1-2), 24-28. https://doi.org/10.1016/j.jns.2013.01.004 4.Herebian, D., Seibt, A., Smits, S. H. J., Rodenburg, R. J., & Mayatepek, E. (2017). 4-Hydroxybenzoic acid restores CoQ10biosynthesis in human COQ2 deficiency. Annals of clinical and translational neurology, 4(12), 902-908. https://doi.org/10.1002/acn3.486 ID: 297
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Pathogenic variants of the mitochondrial metallochaperone SCO1 result in a severe, combined COX and copper deficiency that causes a dilated cardiomyopathy in the murine heart. 1University of Saskatchewan, Canada; 2Auburn University Bibliography
Glerum DM, Shtanko A, Tzagoloff A. Characterization of COX17, a yeast gene involved in copper metabolism and assembly of cytochrome oxidase. J Biol Chem. 1996 Jun 14;271(24):14504-9. doi: 10.1074/jbc.271.24.14504. PMID: 8662933. Srinivasan C, Posewitz MC, George GN, Winge DR. Characterization of the copper chaperone Cox17 of Saccharomyces cerevisiae. Biochemistry. 1998 May 19;37(20):7572-7. doi: 10.1021/bi980418y. PMID: 9585572. Hlynialuk CJ, Ling B, Baker ZN, Cobine PA, Yu LD, Boulet A, Wai T, Hossain A, El Zawily AM, McFie PJ, Stone SJ, Diaz F, Moraes CT, Viswanathan D, Petris MJ, Leary SC. The Mitochondrial Metallochaperone SCO1 Is Required to Sustain Expression of the High-Affinity Copper Transporter CTR1 and Preserve Copper Homeostasis. Cell Rep. 2015 Feb 17;10(6):933-943. doi: 10.1016/j.celrep.2015.01.019. Epub 2015 Feb 13. PMID: 25683716. Baker ZN, Jett K, Boulet A, et al. The mitochondrial metallochaperone SCO1 maintains CTR1 at the plasma membrane to preserve copper homeostasis in the murine heart. Hum Mol Genet. 2017;26(23):4617-4628. doi:10.1093/hmg/ddx344 Leary, S.C., Antonicka, H., Sasarman, F., Weraarpachai, W., Cobine, P.A., Pan, M., Brown, G.K., Brown, R., Majewski, J., Ha, K.C.H., et al. (2013a). Novel mutations in SCO1 as a cause of fatal infantile encephalopathy and lactic acidosis. Hum. Mutat. 34, 1366–1370. ID: 196
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Tissue-specific adaptation of stress responses upon COX10 deficiency 1CECAD Research Center, Germany; 2Institute for Mitochondrial Diseases and Aging, Medical Faculty, University of Cologne ID: 269
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Using iPSC-derived neurons to unravel the pathomechanisms of Leber’s hereditary optic neuropathy 1Unit of Medical Genetics and Neurogenetics, Fondazione IRCCS Istituto Neurologico Carlo Besta, Milano, Italy; 2IRCCS Istituto delle Scienze Neurologiche di Bologna, Programma di Neurogenetica, Bologna, Italy; 3Division of Neuroscience, Istituto di Ricovero e Cura a Carattere Scientifico (IRCCS), San Raffaele Scientific Institute, via Olgettina 60, 20132, Milan, Italy; 4National Research Council (CNR), Institute of Neuroscience, Milan, Italy; 5Department of Medical Sciences, Laboratory for Technologies of Advanced Therapies, University of Ferrara, 44121 Ferrara, Italy; 6Maria Cecilia Hospital, GVM Care & Research, 48033, Cotignola, Ravenna, Italy; 7Department of Biomedical and Neuromotor Sciences (DIBINEM), University of Bologna, Bologna, Italy Bibliography
Danese A, Patergnani S, Maresca A, Peron C, Raimondi A, Caporali L, Marchi S, La Morgia C, Del Dotto V, Zanna C, Iannielli A, Segnali A, Di Meo I, Cavaliere A, Lebiedzinska-Arciszewska M, Wieckowski MR, Martinuzzi A, Moraes-Filho MN, Salomao SR, Berezovsky A, Belfort R Jr, Buser C, Ross-Cisneros FN, Sadun AA, Tacchetti C, Broccoli V, Giorgi C, Tiranti V, Carelli V, Pinton P. Pathological mitophagy disrupts mitochondrial homeostasis in Leber's hereditary optic neuropathy. Cell Rep. 2022 Jul 19;40(3):111124. doi: 10.1016/j.celrep.2022.111124. PMID: 35858578; PMCID: PMC9314546. Peron C, Maresca A, Cavaliere A, Iannielli A, Broccoli V, Carelli V, Di Meo I, Tiranti V. Exploiting hiPSCs in Leber's Hereditary Optic Neuropathy (LHON): Present Achievements and Future Perspectives. Front Neurol. 2021 Jun 8;12:648916. doi: 10.3389/fneur.2021.648916. PMID: 34168607; PMCID: PMC8217617. Peron C, Mauceri R, Cabassi T, Segnali A, Maresca A, Iannielli A, Rizzo A, Sciacca FL, Broccoli V, Carelli V, Tiranti V. Generation of a human iPSC line, FINCBi001-A, carrying a homoplasmic m.G3460A mutation in MT-ND1 associated with Leber's Hereditary optic Neuropathy (LHON). Stem Cell Res. 2020 Oct;48:101939. doi: 10.1016/j.scr.2020.101939. Epub 2020 Aug 3. PMID: 32771908. ID: 418
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Stem cell modelling of mitochondrial disease-linked cardiomyopathy 1Murdoch Children’s Research Institute, The Royal Children's Hospital, Melbourne, VIC, Australia; 2Department of Paediatrics, The University of Melbourne, Melbourne, VIC, Australia; 3Department of Biochemistry and Pharmacology and The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, Australia; 4Department of Biochemistry and Molecular Biology, Monash Biomedicine Discovery Institute, Monash University, Melbourne, VIC, Australia; 5Victorian Clinical Genetics Services, The Royal Children’s Hospital, Melbourne, VIC, Australia; 6The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), Murdoch Children's Research Institute, Melbourne, VIC, Australia; 7Melbourne Centre for Cardiovascular Genomics and Regenerative Medicine, The Royal Children's Hospital, Melbourne, VIC, Australia; 8Department of Anatomy and Physiology, School of Biomedical Sciences, The University of Melbourne, Melbourne, VIC, Australia ID: 316
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Biochemical and computational approaches to dissect the effect of MT-CYB pathogenic mutations on respiratory chain activity and assembly Department of Pharmacy and Biotechnology, University of Bologna, Italy Bibliography
1 Fernández-Vizarra E, Ugalde C. Cooperative assembly of the mitochondrial respiratory chain. Trends Biochem Sci. 2022 2 Rugolo M, Zanna C, Ghelli AM. Organization of the Respiratory Supercomplexes in Cells with Defective Complex III: Structural Features and Metabolic Consequences. Life (Basel). 2021 3 Mishra SK. PSP-GNM: Predicting Protein Stability Changes upon Point Mutations with a Gaussian Network Model. Int J Mol Sci. 2022 ID: 565
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Exploring the assembly and maintenance of mitochondrial complex I by complexome profiling-based approaches 1Institute for Cardiovascular Physiology, Goethe University Frankfurt, Germany; 2Radboud Institute for Molecular Life Sciences, Radboudumc, Nijmegen, The Netherlands Bibliography
[1] S. Guerrero-Castillo, F. Baertling, D. Kownatzki, H.J. Wessels, S. Arnold, U. Brandt, L. Nijtmans, The Assembly Pathway of Mitochondrial Respiratory Chain Complex I, Cell metabolism, 25 (2017) 128-139. [2] H. Heide, L. Bleier, M. Steger, J. Ackermann, S. Drose, B. Schwamb, M. Zornig, A.S. Reichert, I. Koch, I. Wittig, U. Brandt, Complexome profiling identifies TMEM126B as a component of the mitochondrial complex I assembly complex, Cell metabolism, 16 (2012) 538-549. [3] A. Cabrera-Orefice, A. Potter, F. Evers, J.F. Hevler, S. Guerrero-Castillo, Complexome Profiling-Exploring Mitochondrial Protein Complexes in Health and Disease, Front Cell Dev Biol, 9 (2022) 796128. ID: 225
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Functional involvement of actin-binding Gelsolin on mitochondrial Oxphos dysfunction Fundación Hospital 12 de Octubre, Spain Bibliography
García-Bartolomé, A., Peñas, A., Illescas, M., Bermejo, V., López-Calcerrada, S., Pérez-Pérez, R., et al. (2020). Altered Expression Ratio of Actin-Binding Gelsolin Isoforms Is a Novel Hallmark of Mitochondrial OXPHOS Dysfunction. Cells 9, 1922–21. doi:10.3390/cells9091922 Peñas, A., Fernández-De la Torre, M., Laine-Menéndez, S., Lora, D., Illescas, M., García-Bartolomé, A., et al. (2021). Plasma Gelsolin Reinforces the Diagnostic Value of FGF-21 and GDF-15 for Mitochondrial Disorders. Ijms 22, 6396. doi:10.3390/ijms22126396 Illescas M, Peñas A, Arenas J, Martín MA and Ugalde C. 2021. Regulation of Mitochondrial Function by the Actin Cytoskeleton. Front. Cell Dev. Biol. 9:795838. doi: 10.3389/fcell.2021.795838. Fernández-Vizarra E, López-Calcerrada S, Sierra-Magro A, Pérez-Pérez R, Formosa LE, Hock DH, Illescas M, Peñas A, Brischigliaro M, Ding S, Fearnley IM, Tzoulis C, Pitceathly RDS, Arenas J, Martín MA, Stroud DA, Zeviani M, Ryan MT, Ugalde C. 2022 Two independent respiratory chains adapt OXPHOS performance to glycolytic switch. Cell Metab. doi: 10.1016/j.cmet.2022.09.005 ID: 472
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity In vivo role of respiratory complex I NDUFA10 subunit in dNTP homeostasis 1Research Group on Neuromuscular and Mitochondrial Disorders, Vall d’Hebron Institut de Recerca, Universitat Autònoma de Barcelona, Barcelona, Spain; 2Biomedical Network Research Centre on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid, Spain; 3BCNatal | Fetal Medicine Research Center (Hospital Clínic and Hospital Sant Joan de Déu), University of Barcelona, Barcelona 08028, Spain. and Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), University of Barcelona, Barcelona 08036, Spain.; 4Department of Biochemistry and Molecular Biology, Monash Biomedicine Discovery Institute, Monash University, Melbourne, Australia; 5Instituto de Investigación, Hospital Universitario 12 de Octubre, Avda. de Córdoba s/n, 28041 Madrid, Spain.; 6Laboratory of Metabolism and Obesity, Vall d'Hebron - Institut de Recerca, Universitat Autònoma de Barcelona, Barcelona, Spain; CIBERDEM, CIBER on Diabetes and Associated Metabolic Diseases, Instituto de Salud Carlos III, Barcelona, Spain Bibliography
Molina-Granada D, González-Vioque E, Dibley MG, Cabrera-Pérez R, Vallbona-Garcia A, Torres-Torronteras J, Sazanov LA, Ryan MT, Cámara Y, Martí R. Most mitochondrial dGTP is tightly bound to respiratory complex I through the NDUFA10 subunit. Commun Biol. 2022 Jun 23;5(1):620. doi: 10.1038/s42003-022-03568-6. PMID: 35739187; PMCID: PMC9226000. ID: 247
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Modeling POLRMT pathogenic variants in the mouse 1Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden; 2Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm, Sweden; 3Centre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden ID: 425
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity The role of the CCR4 family member ANGEL1 in the expression of mitochondrial-targeted proteins 1Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden; 2Centre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden Bibliography
Chang, K§., Liu, P§., Requejo, G & Bai, H. (2022). mTORC2 protects the heart from high-fat diet-induced cardiomyopathy through mitochondrial fission in Drosophila. Front. Cell Dev. Biol., 2022. https://doi.org/10.3389/fcell.2022.866210 §These authors contributed equally to this work Birnbaum, A., Chang, K., & Bai, H. (2020). FOXO regulates neuromuscular junction homeostasis during Drosophila aging. Front Aging Neurosci, 2021 Jan 27; 12:567861. DOI: 10.3389/fnagi.2020.567861. Huang, K., Miao, T., Chang, K. et al. Impaired peroxisomal import in Drosophila oenocytes causes cardiac dysfunction by inducing upd3 as a peroxikine. Nat Commun 11, 2943 (2020). https://doi.org/10.1038/s41467-020-16781-w Kai Chang§, Ping Kang§, Ying Liu, Kerui Huang, Ting Miao, Antonia P. Sagona, Ioannis P. Nezis, Rolf Bodmer, Karen Ocorr & Hua Bai (2019) TGFB-INHB/activin signaling regulates age-dependent autophagy and cardiac health through inhibition of MTORC2, Autophagy, DOI: 10.1080/15548627.2019.1704117 §These authors contributed equally to this work Kang, P., Chang, K., Liu, Y. et al. Drosophila Kruppel homolog 1 represses lipolysis through interaction with dFOXO. Sci Rep 7, 16369 (2017) doi:10.1038/s41598-017-16638-1 ID: 600
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Tissue-specific bioenergetics in mouse models of mitochondrial disease 1Università di Padova; 2Semmelweis University; 3Universität Innsbruck; 4University of Sussex ID: 490
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Yeast as a tool to investigate variants in mtARS genes associated with mitochondrial diseases 1Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy; 2Unit of Medical Genetics and Neurogenetics, Fondazione IRCCS Istituto Neurologico Carlo Besta, Milan, Italy; 3Department of Medical Physiopathology and Transplantation, University of Milan, Milan, Italy ID: 227
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity A mutation in mouse mt-Atp6 gene induces respiration defects and opposed effects on the cell tumorigenic phenotype 1University of Zaragoza, Spain; 2University of Zaragoza, Peaches Biotech Group, Spain; 3Fundación Centro Nacional de Investigaciones Cardiovasculares Carlos III, Spain Bibliography
1.Moreno-Loshuertos, R.; Marco-Brualla, J.; Meade, P.; Soler-Agesta, R.; Enriquez, J. A.; Fernandez-Silva, P., How hot can mitochondria be? Incubation at temperatures above 43 degrees C induces the degradation of respiratory complexes and supercomplexes in intact cells and isolated mitochondria. Mitochondrion 2023, 69, 83-94. 2.Moreno-Loshuertos, R.; Movilla, N.; Marco-Brualla, J.; Soler-Agesta, R.; Ferreira, P.; Enriquez, J. A.; Fernandez-Silva, P., A Mutation in Mouse MT-ATP6 Gene Induces Respiration Defects and Opposed Effects on the Cell Tumorigenic Phenotype. Int J Mol Sci 2023, 24, (2). 3.Novo, N.; Romero-Tamayo, S.; Marcuello, C.; Boneta, S.; Blasco-Machin, I.; Velázquez-Campoy, A.; Villanueva, R.; Moreno-Loshuertos, R.; Lostao, A.; Medina, M.; Ferreira, P., Beyond a platform protein for the degradosome assembly: The Apoptosis-Inducing Factor as an efficient nuclease involved in chromatinolysis. PNAS Nexus 2022, 2, (2). 4.Soler-Agesta, R.; Marco-Brualla, J.; Minjarez-Saenz, M.; Yim, C. Y.; Martinez-Julvez, M.; Price, M. R.; Moreno-Loshuertos, R.; Ames, T. D.; Jimeno, J.; Anel, A., PT-112 Induces Mitochondrial Stress and Immunogenic Cell Death, Targeting Tumor Cells with Mitochondrial Deficiencies. Cancers (Basel) 2022, 14, (16). 5.Pinol, R.; Zeler, J.; Brites, C. D. S.; Gu, Y.; Tellez, P.; Carneiro Neto, A. N.; da Silva, T. E.; Moreno-Loshuertos, R.; Fernandez-Silva, P.; Gallego, A. I.; Martinez-Lostao, L.; Martinez, A.; Carlos, L. D.; Millan, A., Real-Time Intracellular Temperature Imaging Using Lanthanide-Bearing Polymeric Micelles. Nano Lett 2020, 20, (9), 6466-6472. 6.Gu, Y.; Yoshikiyo, M.; Namai, A.; Bonvin, D.; Martinez, A.; Pinol, R.; Tellez, P.; Silva, N. J. O.; Ahrentorp, F.; Johansson, C.; Marco-Brualla, J.; Moreno-Loshuertos, R.; Fernandez-Silva, P.; Cui, Y.; Ohkoshi, S. I.; Millan, A., Magnetic hyperthermia with epsilon-Fe(2)O(3) nanoparticles. RSC Adv 2020, 10, (48), 28786-28797. 7.Delavallee, L.; Mathiah, N.; Cabon, L.; Mazeraud, A.; Brunelle-Navas, M. N.; Lerner, L. K.; Tannoury, M.; Prola, A.; Moreno-Loshuertos, R.; Baritaud, M.; Vela, L.; Garbin, K.; Garnier, D.; Lemaire, C.; Langa-Vives, F.; Cohen-Salmon, M.; Fernandez-Silva, P.; Chretien, F.; Migeotte, I.; Susin, S. A., Mitochondrial AIF loss causes metabolic reprogramming, caspase-independent cell death blockade, embryonic lethality, and perinatal hydrocephalus. Mol Metab 2020, 40, 101027. ID: 242
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity A systemic Muscle-WAT crosstalk progressively depletes protein and fat stores aggravating mitochondrial myopathy. 1Weill Cornell Medicine, Brain and Mind Research Institute, New York, NY; 2Weill Cornell Medicine, Department of Pharmacology, New York, NY; 3Fondazione Policlinico Universitario A. Gemelli, IRCCS, Rome, Italy; Dipartimento di Neuroscienze, Università Cattolica del Sacro Cuore, Rome, Italy. ID: 646
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity A novel mitochondrial assembly factor RTN4IP1 has an essential role in the final stages of Complex I assembly 1Wellcome Centre for Mitochondrial Research, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; 2Department of Applied Sciences, Faculty of Health & Life Sciences, Northumbria University, Newcastle upon Tyne, UK; 3Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, QC, Canada; 4Department of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110, USA; 5Functional Proteomics Group, Institute for Cardiovascular Physiology, Goethe University Frankfurt, 60590, Frankfurt am Main, Germany Bibliography
1 Charif M et al. Neurologic Phenotypes Associated With Mutations in RTN4IP1 (OPA10) in Children and Young Adults. JAMA Neurol. 2017 ID: 599
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity ETFDH supports OXPHOS efficiency in skeletal muscle by regulating coenzyme Q homeostasis 1Department of Molecular Biology, Centro de Biología Molecular "Severo Ochoa" (CBMSO-UAM-CSIC), Madrid, Spain; 2Instituto Universitario de Biología Molecular (IUBM), Autonomous University of Madrid, Madrid, Spain; 3Centro de Investigación Biomédica en red de Enfermedades Raras (CIBERER), ISCIII, Madrid, Spain; 4Instituto de Investigación Hospital 12 de octubre, i+12, Universidad Autónoma de Madrid, Madrid, Spain ID: 559
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Metabolic rewiring as an adaptive mechanism in COX null cells 1Department of Bioenergetics, Institute of Physiology, Czech Academy of Sciences, Prague, Czech Republic; 2Faculty of Science, Charles University, 12800 Prague, Czech Republic; 3Laboratory of Translational Metabolomics, Institute of Physiology, Czech Academy of Sciences, Prague, Czech Republic ID: 383
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Metabolic rewiring due to progressive increase in mtDNA mutation heteroplasmy reveals markers of disease severity 1North-West University, South Africa; 2Osaka University, Japan; 3Radboud University Medical Center, Netherlands; 4University of Tsukuba, Japan ID: 442
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Novel or rare AIFM1 pathogenic variants: their impact on mitochondrial metabolism and clinical manifestation in eight patients, including 3 girls 1Department of Pediatrics and Inherited Metabolic Disorders, First Faculty of Medicine, Charles University and General University Hospital in Prague; 2Institute of Molecular and Clinical Pathology and Medical Genetics, University Hospital Ostrava ID: 558
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Pathological molecular mechanisms underlying COA8 loss of function 1Department of Biomedical Sciences, University of Padova, Padova, Italy; 2Veneto Institute of Molecular Medicine, Padova, Italy; 3Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands; 4University of Texas Southwestern Medical Center, Dallas, TX, USA; 5Department of Chemical Sciences, University of Padova, Padova, Italy; 6Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany; 7Department of Neurosciences, University of Padova, Padova, Italy Bibliography
Hedberg-Oldfors, C., Darin, N., Thomsen, C., Lindberg, C., and Oldfors, A. (2020). COX deficiency and leukoencephalopathy due to a novel homozygous APOPT1/COA8 mutation. Neurol Genet 6, e464. Melchionda, L., Haack, T.B., Hardy, S., Abbink, T.E., Fernandez-Vizarra, E., Lamantea, E., Marchet, S., Morandi, L., Moggio, M., Carrozzo, R., et al. (2014). Mutations in APOPT1, Encoding a Mitochondrial Protein, Cause Cavitating Leukoencephalopathy with Cytochrome c Oxidase Deficiency. Am J Hum Genet 95, 315-325. Pei, J., Zhang, J., and Cong, Q. (2022). Human mitochondrial protein complexes revealed by large-scale coevolution analysis and deep learning-based structure modeling. Bioinformatics. Sharma, S., Singh, P., Fernandez-Vizarra, E., Zeviani, M., Van der Knaap, M.S., and Saran, R.K. (2018). Cavitating Leukoencephalopathy With Posterior Predominance Caused by a Deletion in the APOPT1 Gene in an Indian Boy. J Child Neurol 33, 428-431. Signes, A., Cerutti, R., Dickson, A.S., Beninca, C., Hinchy, E.C., Ghezzi, D., Carrozzo, R., Bertini, E., Murphy, M.P., Nathan, J.A., et al. (2019). APOPT1/COA8 assists COX assembly and is oppositely regulated by UPS and ROS. EMBO molecular medicine 11. ID: 366
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Retinal pathophysiology characterisation of the novel mitochondrial heteroplasmy mouse model 1University of Cambridge, United Kingdom; 2Newcastle University, United Kingdom ID: 666
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Impaired spermatogenesis driven by mitochondrial dysfunction and ferroptosis in primary spermatocytes in a mouse model of Leigh syndrome 1University of Pennsylvania,USA; 2University of Angers, SFR ICAT, SCIAM, 49000 Angers, France; 3MITOLAB, University of Angers, INSERM U1083, France; 4Pablo de Olavide University, Spain; 5Neuromuscular Reference Center CHU Angers, France ID: 574
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mitophagy dysfunction in mitochondrial myopathy and therapy by mitophagy activator CAP1902 1STEMM Research Program, Biomedicum Helsinki, Faculty of Medicine, University of Helsinki, Helsinki, Finland; 2Wellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; 3Department of Pharmacology, Center for Innovations in Brain Science, University of Arizona, Tucson, AZ, USA; 4Department of Medicine, Endocrinology, and Department of Molecular and Medical Pharmacology, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA ID: 192
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mtfp1 controls oxidative phosphorylation and cell death in liver disease 1Institut Pasteur, Mitochondrial Biology Group, CNRS UMR 3691, Université Paris Cité, Paris, France.; 2Institut Pasteur, Biomics Technological Platform, Université Paris Cité, Paris, France.; 3Institut Pasteur, Bioinformatics and Biostatistics Hub, Université Paris Cité, Paris, France.; 4Institut Pasteur, Proteomics Core Facility, MSBio UtechS, UAR CNRS 2024, Université Paris Cité, Paris, France.; 5Institut Pasteur Ultrastructural Bio Imaging, UTechS, Université Paris Cité, Paris, France.; 6Platform for Metabolic Analyses, SFR Necker, INSERM US24/CNRS UMS 3633, Paris, France.; 7Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Australia. ID: 319
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Non-canonical function of succinate dehydrogenase assembly factor 2 (SDHAF2) during OXPHOS dysfunction 1Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia; 2Murdoch Children's Research Institute, Royal Children's Hospital, Parkville, VIC, Australia; 3Department of Paediatrics, University of Melbourne, Parkville, VIC, Australia; 4Metabolomics Australia, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia; 5Victorian Clinical Genetics Services, Royal Children's Hospital, Parkville, VIC, Australia ID: 502
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity NUAK1-dependent metabolic underpinnings of adult muscle stem cells Physiopathology and Genetics of Neurons and Muscles Laboratory, Institut NeuroMyoGène, Lyon, France ID: 415
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity A novel approach to measure complex V ATP hydrolysis in frozen cell lysates and tissue homogenates 1Department of Medicine, Endocrinology, David Geffen School of Medicine, University of California, Los Angeles, CA, 90095 USA; 2Metabolism Theme, David Geffen School of Medicine, University of California, Los Angeles, CA, 90095, USA; 3Department of Molecular and Medical Pharmacology, University of California, Los Angeles, CA, 90095, USA; 4Molecular & Cellular Integrative Physiology, University of California, Los Angeles, CA, 90095, USA.; 5Institut de Biologia Molecular de Barcelona, IBMB-CSIC, Barcelona, Catalonia, 08028, Spain ID: 440
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity OxPhos defects cause cell-autonomous and whole-body signs of hypermetabolism in cells and in patients with mitochondrial diseases 1Columbia University Irving Medical Center, United States of America; 2University of Florida, United States of America; 3Angers University, UMR CNRS 6015 - INSERM U1083, MitoVasc Institute, Angers, France; 4Yale University, United States of America; 5University of Pennsylvania, United States of America; 6Stanford University, United States of America; 7University of California San Francisco, United States of America; 8Great Ormond Street Hospital for Children NHS Foundation Trust, London, United Kingdom; 9University of Copenhagen, Denmark; 10University of Udine, Italy; 11Altos labs, United States of America; 12University of Texas Southwestern Medical Center, United States of America; 13University of Pittsburgh, United States of America; 14Thomas Jefferson University, United States of America Bibliography
Sturm G et al. A multi-omics longitudinal aging dataset in primary human fibroblasts with mitochondrial perturbations. Sci Data 9, 751 (2022). https://doi.org/10.1038/s41597-022-01852-y Sturm G. et al. OxPhos defects cause hypermetabolism and reduce lifespan in cells and in patients with mitochondrial diseases. Commun Biol 6, 22 (2023). https://doi.org/10.1038/s42003-022-04303-x ID: 605
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Dysfunction of mitochondrial chaperone HSP60 triggers disruption of mitochondrial pathways activating multiple regulatory responses 1Research Unit for Molecular Medicine, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark; 2Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark; 3Department of Forensic Medicine, Aarhus University, Aarhus, Denmark; 4Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark; 5Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark Bibliography
1. Bie AS, Cömert C, Körner R, et al. An inventory of interactors of the human HSP60/HSP10 chaperonin in the mitochondrial matrix space. Cell Stress Chaperones. 2020;25(3):407-416. 2. Bross P, Naundrup S, Hansen J, et al. The Hsp60-(p.V98I) mutation associated with hereditary spastic paraplegia SPG13 compromises chaperonin function both in vitro and in vivo. J Biol Chem. 2008;283(23):15694-15700. 3. Magen D, Georgopoulos C, Bross P, et al. Mitochondrial hsp60 chaperonopathy causes an autosomal-recessive neurodegenerative disorder linked to brain hypomyelination and leukodystrophy. Am J Hum Genet. 2008;83(1):30-42. 4. Cömert C, Brick L, Ang D, et al. A recurrent de novo HSPD1 variant is associated with hypomyelinating leukodystrophy. Cold Spring Harb Mol Case Stud. 2020;6(3):a004879. Published 2020 Jun 12. ID: 365
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Generation of iPSCs derived neural progenitors and cardiomyocytes as cellular models to study the pathophysiology of Pearson Syndrome 1Unit of Medical genetics and Neurogenetics, Fondazione IRCCS Istituto Neurologico Carlo Besta, Milan, Italy; 2Istituto Auxologico Italiano IRCCS, Center for Cardiac Arrhythmias of Genetic Origin and Laboratory of Cardiovascular Genetics, Milan, Italy; 3Department of Biotechnology and Biosciences, University of Milano - Bicocca, Milan, Italy ID: 476
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity High aerobic exercise capacity predicts increased mitochondrial response to exercise training 1Department of Cardiothoracic Surgery, University Hospital of Friedrich-Schiller-University Jena, Germany; 2Department of Physiology and Pharmacology, University of Toledo, Toledo, OH, United States; 3Department of Anesthesiology, University of Michigan, Ann Arbor, MI, United States Bibliography
Heyne E, Schrepper A, Doenst T, Schenkl C, Kreuzer K, Schwarzer M. High-fat diet affects skeletal muscle mitochondria comparable to pressure overload-induced heart failure. J Cell Mol Med. 2020 Jun;24(12):6741-6749. doi: 10.1111/jcmm.15325. Epub 2020 May 4. PMID: 32363733; PMCID: PMC7299710. Schwarzer M, Molis A, Schenkl C, Schrepper A, Britton SL, Koch LG, Doenst T. Genetically determined exercise capacity affects systemic glucose response to insulin in rats. Physiol Genomics. 2021 Sep 1;53(9):395-405. doi: 10.1152/physiolgenomics.00014.2021. Epub 2021 Jul 23. PMID: 34297615; PMCID: PMC8530732. ID: 488
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Investigating the role of LONP1 in heart and skeletal muscle metabolism 1Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), 50931 Cologne, Germany; 2Department III of Internal Medicine, Heart Center, University Hospital of Cologne, 50931 Cologne, Germany; 3Center for Molecular Medicine Cologne (CMMC), 50931 Cologne, Germany ID: 229
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mitochondrial dysfunction promotes liver fibrosis through the ACOT2-MCT6-OXCT1 axis. 1Karolinska Institutet, Sweden; 2Zhengzhou University, China; 3Norwegian Veterinary Institute, Norway Bibliography
Zhou X, Mikaeloff F, Curbo S, Zhao Q, Kuiper R, Végvári Á, Neogi U, Karlsson A.Coordinated pyruvate kinase activity is crucial for metabolic adaptation and cell survival during mitochondrial dysfunction.Hum Mol Genet. 2021 Oct 13;30(21):2012-2026 ID: 655
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity PNC2 (SLC25A36) deficiency associated with the hyperinsulinism/hyperammonemia syndrome 1Università degli Studi di Bari Aldo Moro, Italy; 2Libera Università Mediterranea Giuseppe Degennaro, Italy; 3Department of Pediatrics and Genetics, Al Makassed Hospital and Al-Quds University, Palestine.; 4Department of Genetics, Hadassah, Hebrew University Medical Center, Israel Bibliography
[1] M.A. Shahroor, F.M. Lasorsa, V. Porcelli V, I. Dweikat, M.A. Di Noia, M. Gur, G. Agostino, A . Shaag A, T. Rinaldi, G. Gasparre, F. Guerra, A. Castegna, S. Todisco, B. Abu-Libdeh, O. Elpeleg, L. Palmieri, PNC2 (SLC25A36) Deficiency Associated With the Hyperinsulinism/Hyperammonemia Syndrome, J Clin Endocrinol Metab, 107(2022):1346-1356. [2] L. Jasper, P. Scarcia, S. Rust, J. Reunert, F. Palmieri, T. Marquardt, Uridine Treatment of the First Known Case of SLC25A36 Deficiency, Int J Mol Sci. 22(2021) 9929. [3] Safran A, Proskorovski-Ohayon R, Eskin-Schwartz M, Yogev Y, Drabkin M, Eremenko E, Aharoni S, Freund O, Jean MM, Agam N, Hadar N, Loewenthal N, Staretz-Chacham O, Birk OS.Hyperinsulinism/hyperammonemia syndrome caused by biallelic SLC25A36 mutation. J Inherit Metab Dis. 2023 Jan 25. doi: 10.1002/jimd.12594. Online ahead of print ID: 397
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Cultured neurons with CoQ10 deficiency reveal alterations of lipid metabolism 1Department of Neurology, Columbia University Irving Medical Center, New York, NY, 10032, United States; 2IRCCS Foundation Ca' Granda Ospedale Maggiore Policlinico, Dino Ferrari Center, Neuroscience Section, Department of Pathophysiology and Transplantation, University of Milan, Milan, Italy; 3Institute of Biotechnology, Biomedical Research Center (CIBM), Health Science Technological Park (PTS), University of Granada, Armilla, Granada, 18100, Spain; 4Department of Pharmacy Practice and Science, College of Pharmacy, University of Nebraska Medical Center, 986145 Nebraska Medical Center, Omaha, NE; 5Unita` di Genetica delle Malattie Neurodegenerative e Metaboliche, Fondazione IRCCS Istituto Neurologico "Carlo Besta", Milan, 20126, Italy Bibliography
1. Turunen, M.; Olsson, J.; Dallner, G. Metabolism and function of coenzyme Q. Biochim. Biophys. Acta - Biomembr. 2004, 1660, 171–199, doi:10.1016/j.bbamem.2003.11.012. 2. Quinzii, C.M.; López, L.C.; Gilkerson, R.W.; Dorado, B.; Coku, J.; Naini, A.B.; Lagier-Tourenne, C.; Schuelke, M.; Salviati, L.; Carrozzo, R.; et al. Reactive oxygen species, oxidative stress, and cell death correlate with level of CoQ10 deficiency. FASEB J. 2010, 24, 3733–3743, doi:10.1096/fj.09-152728. 3. Emma, F.; Montini, G.; Parikh, S.M.; Salviati, L. Mitochondrial dysfunction in inherited renal disease and acute kidney injury. 2016, doi:10.1038/nrneph.2015.214. 4. Ernster, L.; Dallner, G. Biochemical, physiological and medical aspects of ubiquinone function. Biochim. Biophys. Acta 1995, 1271, 195–204. ID: 426
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration 1Faculty of Biochemistry and Molecular Medicine, University of Oulu, Finland; 2Biocenter Oulu, University of Oulu, Oulu, Finland; 3Faculty of Physics, University of Warsaw, Warsaw, Poland; 4Molecular and Cellular Modeling Group, Heidelberg Institute for Theoretical Studies (HITS), Heidelberg, Germany; 5Department of Biochemistry and Molecular Biology, University of Würzburg, Würzburg, Germany; 6Zentrum für Molekulare Biologie (ZMBH), DKFZ-ZMBH Alliance and Interdisciplinary Center for Scientific Computing (IWR), Heidelberg University, Heidelberg, Germany Bibliography
Rahman M.T., Koski M.K., Panecka-Hofman J., Schmitz W, Kastaniotis A.J., Wade R.C., Wierenga R.K., Hiltunen J.K. & Autio K.J. (2023) An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration. Nature Communications 14(1):619. doi: 10.1038/s41467-023-36358-7 Alam J., Sah-Teli S.K., Venkatesan R., Koski M.K., Autio K.J., Hiltunen J K. & Kastaniotis A.J. (2021) Biophysical and structural analysis of the SAM-dependent Saccharomyces cerevisiae methyltransferase family protein Rsm22. Acta Crystallographica Section D. 77:840-853 Kastaniotis A.J., Autio K.J. & Nair R.R. (2021) Mitochondrial fatty acids and neurodegenerative disorders. Neuroscientist 27(2):143-158 ID: 561
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Antibiotics directly affect mitochondrial respiration 1Technische Universität München, Germany; 2Oroboros Instruments GmbH, Innsbruck, Austria; 3Helmholtz Zentrum München, Germany Bibliography
[1] Tarantino G. et al. (2017): Hepatol Res. 37:410‐415 [2] O'Reilly M. et al. (2019):. Front Cell Neurosci. 13;13:416. doi: 10.3389/fncel.2019.00416. [3] Oyebode OT. et al. (2018) Toxicology Mechanisms and Methods, 1–31.doi:10.1080/15376516.2018.1528651 ID: 471
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Can transmission of mitochondria over the species barrier promote climate change adaptation? 1Tampere University, Finland; 2University of Eastern Finland Bibliography
Gaertner K, Michell C, Tapanainen R, et al. Molecular phenotyping uncovers differences in basic housekeeping functions among closely related species of hares (Lepus spp., Lagomorpha: Leporidae) [published online ahead of print, 2022 Nov 1]. Mol Ecol. 2022; doi:10.1111/mec.16755 ID: 626
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Developing an in vitro model to study the impact of the m.3243A>G mutation in iPSC-derived myofibers University College London, United Kingdom ID: 334
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Discordant phenotype in fibroblast cell lines generated from the same MELAS patient 1IRCCS Istituto delle Scienze Neurologiche di Bologna, Italy; 2Department of Biomedical and Neuromuscular Sciences (DIBINEM), University of Bologna ID: 531
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Generation of a novel CoQ deficient mouse model to elucidate the role of COQ4 Department of Neurology, Columbia University Irving Medical Center, New York, New York, USA. Bibliography
1.Guerra, R.M. and D.J. Pagliarini, Coenzyme Q biochemistry and biosynthesis. Trends Biochem Sci, 2023. 2.Alcázar-Fabra, M., E. Trevisson, and G. Brea-Calvo, Clinical syndromes associated with Coenzyme Q. Essays Biochem, 2018. 62(3): p. 377-398. 3.Belogrudov, G.I., et al., Yeast COQ4 encodes a mitochondrial protein required for coenzyme Q synthesis. Arch Biochem Biophys, 2001. 392(1): p. 48-58. 4.Casarin, A., et al., Functional characterization of human COQ4, a gene required for Coenzyme Q10 biosynthesis. Biochem Biophys Res Commun, 2008. 372(1): p. 35-9. 5.Marbois, B., et al., Coq3 and Coq4 define a polypeptide complex in yeast mitochondria for the biosynthesis of coenzyme Q. J Biol Chem, 2005. 280(21): p. 20231-8. 6.Marbois, B., et al., The yeast Coq4 polypeptide organizes a mitochondrial protein complex essential for coenzyme Q biosynthesis. Biochim Biophys Acta, 2009. 1791(1): p. 69-75. ID: 414
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Perivascular adipose tissue remodeling impairs mitochondrial function in thermoneutral-housed rats 1University of Colorado/Rocky Mountain Regional VA Medical Center, United States of America; 2Cornell College, United States of America Bibliography
1. Chun J.H., Henckel M.M., Knaub L.A., Hull S.E., Pott G.B., Ramirez D.G., Reusch J.E.-B., Keller A.C. (-)-Epicatechin Reverses Glucose Intolerance in Rats Housed at Thermoneutrality. Planta Med. 2022 Aug;88(9-10):735-744. doi: 10.1055/a-1843-9855. 2. Keller A.C., Chun J.H., Knaub L.A., Henckel M.M., Hull S.E., Scalzo R.L., Pott G.B., Walker L.A., Reusch J.E.-B. Thermoneutrality induces vascular dysfunction and impaired metabolic function in male Wistar rats: a new model of vascular disease. J Hypertens. 2022 Nov 1;40(11):2133-2146. doi: 10.1097/HJH.0000000000003153. 3. Vaughan O.R., Rosario F.J., Chan J., Cox L.A., Ferchaud-Roucher V., Zemski-Berry K.A., Reusch J.E.- B., Keller A.C., Powell T.L., Jansson T. Maternal obesity causes fetal cardiac hypertrophy and alters adult offspring myocardial metabolism in mice. J Physiol. 2022 Jul;600(13):3169-3191. doi: 10.1113/JP282462. 4. Chun J.H., Henckel M.M., Knaub L.A., Hull S.E., Pott G., Walker, L.A., Reusch J.E.B., Keller A.C. (–)-Epicatechin improves vasoreactivity and mitochondrial respiration in thermoneutral-housed Wistar rat vasculature. Nutrients. 2022 14(5), 1097;doi.org/10.3390/nu14051097. 5. Keller, A.C., Hull, S.E., Elajaili, H., Johnston, A., Knaub, L.A., Chun, J.H., Walker, L.A., Nozik-Grayck, E., Reusch, J.E.-B. (–)-Epicatechin Modulates Mitochondrial Redox in Vascular Cell Models of Oxidative Stress. Oxidative Medicine and Cellular Longevity. 2020. doi.org/10.1155/2020/6392629 ID: 595
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Temporal analysis of mitochondrial complexome profiling coupled to multi-omics analysis unveils implications of CIV remodelling in postnatal heart development University of Cologne, Germany Bibliography
1. Porter Jr G., et al. (2011) Bioenergetics, mitochondria, and cardiac myocyte differentiation. Prog. Pediatr. Cardiol. 31, 75–81. doi: 10.1016/j.ppedcard.2011.02.002; 2. Gan J., Sonntag H-J., Tang Mk., Cai D., Lee KKH. (2015) Integrative Analysis of the Developing Postnatal Mouse Heart Transcriptome. PLoS ONE 10 (7): e0133288. doi:10.1371/journal.pone.0133288 3. Gu Y., et al. (2022) Multi-omics profiling visualizes dynamics of cardiac development and functions, Cell Reports, Volume 41, Issue 13,111891, ISSN 2211-1247, https://doi.org/10.1016/j.celrep.2022.111891. 4.Talman V., et al. (2018). Molecular Atlas of Postnatal Mouse Heart Development. J Am Heart Assoc. 2018;7:e010378. DOI: 10.1161/JAHA.118.010378 ID: 258
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mitochondrial dysfunction in immune cells leads to distinct transcriptome profile and improved immune competence in Drosophila 1Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland; 2Department of Molecular Biology, Umeå University, Umeå, Sweden; 3Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, United Kingdom ID: 376
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Molecular mechanisms of extraocular muscle manifestation in mitochondrial myopathy STEMM, Faculty of Medicine, University of Helsinki, 00290 Helsinki, Finland Bibliography
Forsström, S., Jackson, C. B., Carroll, C. J., Kuronen, M., Pirinen, E., Pradhan, S., … Suomalainen, A. (2019). Fibroblast Growth Factor 21 Drives Dynamics of Local and Systemic Stress Responses in Mitochondrial Myopathy with mtDNA Deletions. Cell Metabolism, 1–15. https://doi.org/10.1016/j.cmet.2019.08.019. Khan, N. A., Nikkanen, J., Yatsuga, S., Jackson, C., Wang, L., Pradhan, S., … Suomalainen, A. (2017). mTORC1 Regulates Mitochondrial Integrated Stress Response and Mitochondrial Myopathy Progression. Cell Metabolism, 26(2), 419-428.e5. https://doi.org/10.1016/j.cmet.2017.07.007 Pradhan, S...Lopus M (2017) “Elucidation of the Tubulin-Targeted Mechanism of Action of 9-(3-Pyridyl) Noscapine.” Cur. Top. in Medicinal Chemistry, vol. 17, no. 22, 2017, pp. 2569–74, doi:http://dx.doi.org/10.2174/1568026617666170104150304. ID: 572
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Redox metabolites and transporters: Differential expression and ratios in specific Ndufs4 knockout mice organs. Human Metabolomics, North-West University, South Africa ID: 475
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity What makes folding of a mitochondrial protein dependent on the HSP60/HSP10 chaperone complex? Aarhus University and Aarhus University Hospital, Denmark Bibliography
1.Henriques, B. J., Katrine Jentoft Olsen, R., Gomes, C. M., andBross, P. (2021) Electron transfer flavoprotein and its role in mitochondrial energy metabolism in health and disease Gene 145407 10.1016/j.gene.2021.145407 2.Cömert, C., Brick, L., Ang, D., Palmfeldt, J., Meaney, B. F., Kozenko, M. et al. (2020) A recurrent de novo HSPD1 variant is associated with hypomyelinating leukodystrophy Cold Spring Harb Mol Case Stud 6, 10.1101/mcs.a004879 3.Bie, A. S., Comert, C., Korner, R., Corydon, T. J., Palmfeldt, J., Hipp, M. S. et al. (2020) An inventory of interactors of the human HSP60/HSP10 chaperonin in the mitochondrial matrix space Cell Stress Chaperones 25, 407-416 10.1007/s12192-020-01080-6 4.Palmfeldt, J., andBross, P. (2017) Proteomics of human mitochondria Mitochondrion 33, 2-14 10.1016/j.mito.2016.07.006 ID: 385
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity OXPHOS composition is altered in the FXNI151F mouse model of Friedreich Ataxia in a progressive and a tissue-specific way Dept. Ciències Mèdiques Bàsiques, Fac. Medicina, Universitat de Lleida. IRB Lleida. Bibliography
Medina-Carbonero M, Sanz-Alcázar A, Britti E, Delaspre F, Cabiscol E, Ros J, Tamarit J. Mice harboring the FXN I151F pathological point mutation present decreased frataxin levels, a Friedreich ataxia-like phenotype, and mitochondrial alterations. Cell Mol Life Sci. 2022 Jan 17;79(2):74. ID: 482
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Disease causing-Mfn2 mutations alter mitochondrial fusion and fission dynamics and metabolism. 1Department of Clinical Neurosciences, School of Clinical Medicine, University of Cambridge, Cambridge, UK.; 2School of Biological Sciences, Department of Cellular and Molecular Biology, Pontificia Universidad Catolica de Chile, Santiago, Chile. ID: 284
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Dissecting the mitochondrial disease-associated ATAD3 gene cluster and its pathogenic variants 1Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria,Australia; 2Murdoch Children's Research Institute, Royal Children's Hospital, Melbourne, Victoria, Australia; 3Department of Paediatrics, University of Melbourne, Melbourne, Victoria, Australia; 4Ian Holmes Imaging Centre, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Melbourne, Victoria, Australia; 5Victorian Clinical Genetics Services, Royal Children's Hospital, Melbourne, Victoria, Australia; 6Department of Biochemistry and Molecular Biology, Monash Biomedicine Discovery Institute, Monash University, Melbourne, Victoria, Australia; 7Harry Perkins Institute of Medical Research and The University of Western Australia Centre for Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia; 8ARC Centre of Excellence in Synthetic Biology, QEII Medical Centre and University of Western Australia, Nedlands, Western Australia, Australia; 9Telethon Kids Institute, Northern Entrance, Perth Children's Hospital, 15 Hospital Avenue, Nedlands, Western Australia, Australia; 10Mass Spectrometry and Proteomics Facility, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Victoria, Australia ID: 340
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Dynamics of adenine nucleotides in colorectal cancer clinical material 1National Institute of Chemical Physics and Biophysics, Estonia; 2Tallinn University of Technology, Estonia; 3North Estonia Medical Centre Bibliography
Klepinin, A., Miller, S., Reile, I., Puurand, M., Rebane-Klemm, E., Klepinina, L., Vija, H., Zhang, S., Terzic, A., Dzeja, P., & Kaambre, T. (2022). Stable Isotope Tracing Uncovers Reduced γ/β-ATP Turnover and Metabolic Flux Through Mitochondrial-Linked Phosphotransfer Circuits in Aggressive Breast Cancer Cells. Frontiers in oncology, 12, 892195. https://doi.org/10.3389/fonc.2022.892195 Reinsalu, L., Puurand, M., Chekulayev, V., Miller, S., Shevchuk, I., Tepp, K., Rebane-Klemm, E., Timohhina, N., Terasmaa, A., & Kaambre, T. (2021). Energy Metabolic Plasticity of Colorectal Cancer Cells as a Determinant of Tumor Growth and Metastasis. Frontiers in oncology, 11, 698951. https://doi.org/10.3389/fonc.2021.698951 Kaup, K. K., Toom, L., Truu, L., Miller, S., Puurand, M., Tepp, K., Käämbre, T., & Reile, I. (2021). A line-broadening free real-time 31P pure shift NMR method for phosphometabolomic analysis. The Analyst, 146(18), 5502–5507. https://doi.org/10.1039/d1an01198g ID: 521
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity The role of SURF1 protein in cytochrome c oxidase biogenesis 1Institute of Physiology of the Czech Academy of Sciences, Czech Republic; 2Institute of Microbiology, Czech Academy of Sciences, Trebon, Czech Republic; 3Departement of Biomedical Sciences, University of Padova, Padova, Italy; 4Departement of Neurosciences, University of Padova, Padova, Italy Bibliography
N. Kovářová, P. Pecina, H. Nůsková, M. Vrbacký, M. Zeviani, T. Mráček, C. Viscomi, J. Houštěk, Tissue- and species-specific differences in cytochrome c oxidase assembly induced by SURF1 defects, BBA, 1862 (2016), 705-15. ID: 447
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Depicting inclusion body myositis using a patient-derived fibroblast model 1Laboratory of Inherited Metabolic Disorders and Muscle Disease, Centre de Recerca Biomèdica CELLEX - Institut d’Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS) and Faculty of Medicine and Health Sciences, University of Barcelona, Barcelona, Spain; 2Department of Internal Medicine, Hospital Clinic of Barcelona, Barcelona, Spain; 3CIBERER— Spanish Biomedical Research Centre in Rare Diseases, Madrid, Spain; 4CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Spain; 5Universitat Pompeu Fabra (UPF), Barcelona, Spain; 6Department of Clinical Biochemistry, Institut de Recerca Sant Joan de Déu; Esplugues de Llobregat, Barcelona, Spain; 7Department of Cell Death and Proliferation, Institute of Biomedical Research of Barcelona (IIBB-CSIC), Liver Unit-HCB-IDIBAPS, Barcelona, Spain; 8CIBEREHD-Spanish Biomedical Research Centre in Hepatic and Digestive Diseases, Madrid, Spain; 9Department of Biomedicine, Cell Biology Unit, CELLEX-IDIBAPS, Faculty of Medicine and Health Sciences, University of Barcelona, Barcelona, Spain ID: 223
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Effect of physiological cell culture media on cell viability and NRF2 activation National Institute of Chemical and Biological Physics, Estonia ID: 637
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Genetic and functional characterization of a new patient with COX4I1 deficiency 1Hospital Clinic, IDIBAPS, CIBERER, Barcelona, Spain; 2Hospital Universitario de Cruces, Spain ID: 233
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Application of the Escherichia coli Model System to Study the Human Polyribonucleotide Phosphorylase Università degli Studi di Milano, Italy ID: 523
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Phase two biotransformation is highly affected by mitochondrial disease: considerations for pharmacological therapies. Human Metabolomics, North-West University, South Africa Bibliography
1.Kühn, S., Williams, M. E., Dercksen, M., Sass, J. O., & van der Sluis, R. (2023). The glycine N-acyltransferases, GLYAT and GLYATL1, contribute to the detoxification of isovaleryl-CoA-an in-silico and in vitro validation. Computational and Structural Biotechnology Journal, 21, 1236-1248. https://doi.org/10.1016/j.csbj.2023.01.041 2.Gruosso, F., Montano, V., Simoncini, C., Siciliano, G., & Mancuso, M. (2020). Therapeutical Management and Drug Safety in Mitochondrial Diseases—Update 2020. Journal of Clinical Medicine, 10(1), 94. MDPI AG. Retrieved from http://dx.doi.org/10.3390/jcm10010094 3.Fouché, B. R. (2021). Differential expression of genes involved in phase two biotransformation in an NDUFS4 deficient mouse model (Master’s dissertation, North-West University (South Africa)). http://hdl.handle.net/10394/38596 ID: 436
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mitochondrial phenotyping of fibroblasts from Kearns Sayre’s patients to model the disease 1Laboratory of Inherited Metabolic Disorders and Muscle Disease, Centre de Recerca Biomèdica CELLEX - Institut d’Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Faculty of Medicine and Health Sciences - Universitat de Barcelona (UB); Barcelona, Spain.; 2Internal Medicine Department - Hospital Clínic de Barcelona; Barcelona, Spain.; 3CIBERER—Spanish Biomedical Research Centre in Rare Diseases; Madrid, Spain.; 4Hospital Sant Joan de Déu (HSJdD) de Barcelona, Barcelona, Spain.; 5Grupo de Enfermedades Mitocondriales, Instituto de Investigación Hospital 12 de Octubre (imas12). Madrid. Spain.; 6Centro de Biología Molecular S.O., Universidad Autónoma de Madrid (UAM); Madrid, Spain. ID: 343
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Effect of various mutations in the GTPase and middle domain of Drp1 on the mitochondrial network, nucleoids, and peroxisomes 1Department of Paediatrics and Inherited Metabolic Disorders, Charles University and General University Hospital in Prague, Prague, Czech Republic; 2Institute of Physiology, The Czech Academy of Sciences, Prague, Czech Republic ID: 317
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Importance of human ClpXP protease for mitochondrial function First Faculty of Medicine, Charles University; and General University Hospital in Prague ID: 581
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Ketogenic diet mitigates the pathogenic phenotype in TMEM70 deficient animal models 1Institute of Physiology of the Czech Acad. Sci., Prague, Czech Republic; 2Institute of Molecular Genetics of the Czech Acad. Sci., Prague, Czech Republic; 3Faculty of Medicine, Charles University, Hradec Kralove, Czech Republic ID: 276
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mutation in Coq5 leads to CoQ10 deficiency, developmental delay and early death in zebrafish 1Physiology Department, Biomedical Research Center, University of Granada, Granada, Spain; 2Ibs.Granada, Granada, Spain Bibliography
[1] Malicdan MCV, Vilboux T, Ben-Zeev B, et al. A novel inborn error of the coenzyme Q10 biosynthesis pathway: cerebellar ataxia and static encephalomyopathy due to COQ5 C-methyltransferase deficiency. Hum Mutat. 2018;39(1):69-79 ID: 364
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Omega-3 supplementation effects on mitochondrial and metabolic profile in a rabbit model of intrauterine growth restriction 1Inherited metabolic diseases and muscular disorders Lab, Cellex - Institut d’Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Faculty of Medicine and Health Science - University of Barcelona (UB), 08036 Barcelona, Spain; 2Internal Medicine Unit, Medicine Department, Hospital Clínic of Barcelona, 08036 Barcelona, Spain; 3Biomedical Network Research Centre on Rare Diseases (CIBERER), Instituto de Salud Carlos III, 28029 Madrid, Spain; 4BCNatal—Barcelona Centre for Maternal-Foetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), IDIBAPS, University of Barcelona, 08036 Barcelona, Spain; 5Department of Clinical Biochemistry, Institut de Recerca de Sant Joan de Deu, Esplugues de Llobregat, 08036 Barcelona, Spain ID: 616
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Redundant and divergent roles of COQ8A and COQ8B in cell metabolism. 1Clinical Genetics Unit, Department of Women and Children’s Health, University of Padova and “Fondazione Istituto di Ricerca Pediatrica Città Della Speranza”, 35127 Padova, Italy.; 2Department of Biosciences, Biotechnologies and Biopharmaceutics, University of Bari Aldo Moro, 70121 Bari, Italy; 3Department of Biomedical and Neuromotor Sciences, University of Bologna, I-40126 Bologna, Italy. ID: 305
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Loss of CHCHD8 (COA4) caused mitochondrial respiratory Complex IV deficiency National Defense Academy, Japan ID: 341
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Delving into the phenotypic heterogeneity of Coenzyme Q biosynthesis defects 1Centro Andaluz de Biología del Desarrollo/Universidad Pablo de Olavide-CSIC-JA, Seville, Spain; 2CIBERER, Instituto de Salud Carlos III, Madrid, Spain; 3Laboratorio de Fisiopatología Celular y Bioenergética, Seville, Spain. ID: 654
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Investigating the impact of mtDNA point mutations on mitochondrial function and bioenergetics using patient fibroblasts and hiPSC derived neuronal models University College London, United Kingdom ID: 632
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Human COQ10A and COQ10B genes are essential for Coenzyme Q function in mitochondrial respiration 1University of Padova, Italy; 2Isituto di Ricerca Pediatrica - Cittá della Speranza, Italy; 3Pablo de Olavide University, Sevilla, Spain Bibliography
[1] Stefely JA, Pagliarini DJ. Biochemistry of Mitochondrial Coenzyme Q Biosynthesis. Trends Biochem Sci. 2017 Oct;42(10):824-843. doi: 10.1016/j.tibs.2017.06.008. Epub 2017 Sep 17. PMID: 28927698; PMCID: PMC5731490. [2] Tsui HS, Pham NVB, Amer BR, Bradley MC, Gosschalk JE, Gallagher-Jones M, Ibarra H, Clubb RT, Blaby-Haas CE, Clarke CF. Human COQ10A and COQ10B are distinct lipid-binding START domain proteins required for coenzyme Q function. J Lipid Res. 2019 Jul;60(7):1293-1310. doi: 10.1194/jlr.M093534. Epub 2019 May 2. PMID: 31048406; PMCID: PMC6602128. ID: 286
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity The use of β-RA in leptin-deficient mice reveals novel mechanisms of this compound for the treatment of obesity 1Physiology Department, Biomedical Research Center, University of Granada, Granada, Spain; 2Ibs.Granada, Granada, Spain Bibliography
Santos AL, Sinha S. Obesity and aging: Molecular mechanisms and therapeutic approaches. Ageing Res Rev. 2021;67:101268 Hidalgo-Gutiérrez A, Barriocanal-Casado E, Díaz-Casado ME, et al. β-RA Targets Mitochondrial Metabolism and Adipogenesis, Leading to Therapeutic Benefits against CoQ Deficiency and Age-Related Overweight. Biomedicines. 2021;9(10):1457 ID: 274
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Oocyte-specific mitofusin 2 knockout enhances the metabolic disfunction of offspring born to obese mothers Federal University of Sao Carlos, Brazil Bibliography
GARCIA, B.M.; MACHADO, T.S.; CARVALHO, K.F.; NOLASCO, P.; NOCITI, R.P.; DEL COLLADO, M.; CAPO BIANCO, M.J.D.; GREJO, M.P.; AUGUSTO NETO, J.D.; SUGIYAMA, F.H.C.; TOSTES, K.; PANDEY, A.K.; GONÇALVES, L.M.; PERECIN, F.; MEIRELLES, F.V.; FERRAZ, J.B.S.; VANZELA, E.C.; BOSCHERO, A.C.; GUIMARÃES, F.E.G.; ABDULKADER, F.; LAURINDO, F.R. M.; KOWALTOWSKI, A.J.; CHIARATTI, M.R. Mice born to females with oocyte-specific deletion of mitofusin 2 have increased weight gain and impaired glucose homeostasis. Molecular Human Reproduction, v. 26, p. 938-952, 2020. ID: 489
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Off-target effects of etomoxir: inhibition of mitochondrial Complex I and fatty acid oxidation 1Oroboros Instruments, Innsbruck, Austria; 2Dept Biochem, Semmelweis Univ, Budapest, Hungary; 3CNC-Center Neurosci and Cell Biol, Univ Coimbra, Portugal; 4IIUC-Inst Interdisciplinary Research, Univ Coimbra, Portugal; 5CIBB-Center for Innovative Biomed Biotechnol, Univ Coimbra, Portugal; 6PDBEB-PhD Programme in Exp Biol Biomed, IIUC, Univ Coimbra, Portugal; 7Lab Pharmaceut Pharmacol, Latvian Inst Organic Synthesis, Riga, Latvia Bibliography
Fischer C, Valente de Souza L, Komlódi T, Garcia-Souza LF, Volani C, Tymoszuk P, Demetz E, Seifert M, Auer K, Hilbe R, Brigo N, Petzer V, Asshoff M, Gnaiger E, Weiss G (2022) Mitochondrial respiration in response to iron deficiency anemia. Comparison of peripheral blood mononuclear cells and liver. https://doi.org/10.3390/metabo12030270 Komlódi T, Tretter L (2022) The protonmotive force – not merely membrane potential. Bioenerg Commun 2022.16. https://doi.org/10.26124/bec:2022-0016 Pallag G, Nazarian S, Ravasz D, Bui D, Komlódi T, Doerrier C, Gnaiger E, Seyfried TN, Chinopoulos C (2022) Proline oxidation supports mitochondrial ATP production when Complex I is inhibited. https://doi.org/10.3390/ijms23095111 Komlódi T, Cardoso LHD, Doerrier C, Moore AL, Rich PR, Gnaiger E (2021) Coupling and pathway control of coenzyme Q redox state and respiration in isolated mitochondria. https://doi.org/10.26124/bec:2021-0003 Komlódi T, Sobotka O, Gnaiger E (2021) Facts and artefacts on the oxygen dependence of hydrogen peroxide production using Amplex UltraRed. https://doi.org/10.26124/bec:2021-0004 ID: 542
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Mitochondrial alterations in sirtuin1 heterozygous mice fed high fat diet and melatonin 1Dept Biomedical Sciences for Health, University of Milan, Milan, Italy; 2Laboratorio Morfologia Umana Applicata, IRCCS Policlinico San Donato, Milan, Italy; 3Dept Clinical and Experimental Sciences, University of Brescia, Brescia, Italy; 4Center for Electron Microscopy, University of Belgrade, Belgrade, Serbia; 5Instituto de Investigaciones Biomedicas “Alberto Sols” (CSIC-UAM), Madrid, Spain Bibliography
1. Paramesha B. et al. Antioxidants (2021) 10: 338; 2. Stacchiotti A. et al. Cells (2019) 8: 1053. 3. Stacchiotti A et al. Nutrients (2017) 9:1323. ID: 1300
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Microproteins in metabolic regulation 1Duke-NUS Medical School, Singapore; 2University of Melbourne, Australia; 3University of Utah, USA; 4University of Southampton, UK Bibliography
Lena Ho, PhD (lead PI), is regarded as a pioneer in the field of microprotein research with over 30 primary research articles (5991 citations, H-index of 21) in top-tier journals. With more than 12 years of experience in microprotein discovery, functionalization and therapeutic development, Lena and her team have developed a framework of bioinformatic tools for mining ribo-seq data for disease-relevant small ORF peptides, as well as an extensive range of biochemical tools to validate their function and uncover their molecular mechanism. Lena is an EMBO Young Investigator and HHMI international scholar. Recent publications : 1) Coding and non-coding roles of MOCCI (C15ORF48) coordinate to regulate host inflammation and immunity. Lee CQE, Kerouanton B, Chothani S, Zhang S, Chen Y, Mantri CK, Hock DH, Lim R, Nadkarni R, Huynh VT, Lim D, Chew WL, Zhong FL, Stroud DA, Schafer S, Tergaonkar V, St John AL, Rackham OJL, Ho L. Nat Commun. 2021 Apr 9;12(1):2130. doi: 10.1038/s41467-021-22397-5. 2) Mitochondrial microproteins link metabolic cues to respiratory chain biogenesis. Liang C, Zhang S, Robinson D, Ploeg MV, Wilson R, Nah J, Taylor D, Beh S, Lim R, Sun L, Muoio DM, Stroud DA, Ho L. Cell Rep. 2022 Aug 16;40(7):111204. doi: 10.1016/j.celrep.2022.111204. 3) Mitochondrial peptide BRAWNIN is essential for vertebrate respiratory complex III assembly. Zhang S, Reljić B, Liang C, Kerouanton B, Francisco JC, Peh JH, Mary C, Jagannathan NS, Olexiouk V, Tang C, Fidelito G, Nama S, Cheng RK, Wee CL, Wang LC, Duek Roggli P, Sampath P, Lane L, Petretto E, Sobota RM, Jesuthasan S, Tucker-Kellogg L, Reversade B, Menschaert G, Sun L, Stroud DA, Ho L. 4) Viral proteases activate the CARD8 inflammasome in the human cardiovascular system. Nadkarni R, Chu WC, Lee CQE, Mohamud Y, Yap L, Toh GA, Beh S, Lim R, Fan YM, Zhang YL, Robinson K, Tryggvason K, Luo H, Zhong F, Ho L. J Exp Med. 2022 Oct 3;219(10):e20212117. doi: 10.1084/jem.20212117. Epub 2022 Sep 21. ID: 1301
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Oxphos deficiency indicates novel functions for the mitochondrial protein import subunit tim50 1Department of Biochemistry and Pharmacology and the Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, 3010, Australia; 2Queensland Children’s Hospital, Department of Metabolic Medicine, South Brisbane, Brisbane, Queensland, 4001, Australia; 3Murdoch Children’s Research Institute, Royal Children’s Hospital, Melbourne, Victoria, 3052, Australia; 4Department of Paediatrics, University of Melbourne, Melbourne, Victoria, 3052, Australia; 5Victorian Clinical Genetics Services, Royal Children’s Hospital, Melbourne, Victoria, 3052, Australia ID: 1226
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity The levels and activation state of the pyruvate dehydrogenase complex modulate the SCAFI-dependent organization of the mitochondrial respiratory chain 1Instituto de Investigación Hospital 12 de Octubre, Madrid 28041, Spain; 2Department of Biomedical Sciences, University of Padova, 35131 Padova, Italy; 3Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), U723, Madrid, Spain Bibliography
Fernández-Vizarra E, López-Calcerrada S, Sierra-Magro A, Pérez-Pérez R, Formosa LE, Hock DH, Illescas M, Peñas A, Brischigliaro M, Ding S, Fearnley IM, Tzoulis C, Pitceathly RDS, Arenas J, Martín MA, Stroud DA, Zeviani M, Ryan MT, Ugalde C. Two independent respiratory chains adapt OXPHOS performance to glycolytic switch. Cell Metab. 2022 Nov 1;34(11):1792-1808.e6. doi: 10.1016/j.cmet.2022.09.005. PMID: 36198313. ID: 631
Modelling pathogenic mechanisms: OXPHOS, metabolic rewiring and tissue specificity Development of a yeast model to characterize OPA1 mutations associated with different neuromuscular disorders 1Clinical Genetics Unit, Department of Women’s and Children’s Health, University of Padua, and Istituto di Ricerca Pediatrica (IRP) Città della Speranza, Padua, Italy; 2Department of Biomedical Sciences, University of Padua, Padua, Italy ID: 263
Clinical 1: from new genes to old and novel phenotypes An ultra-special family with an ultra-rare condition: three children with mithochondrial complex III deficiency due to homozygous mutations in Lyrm7 Bolzano Hospital, Italy Bibliography
Invernizzi, Federica et al. “A homozygous mutation in LYRM7/MZM1L associated with early onset encephalopathy, lactic acidosis, and severe reduction of mitochondrial complex III activity.” Human mutation. 2013. Sánchez E et al. LYRM7/MZM1L is a UQCRFS1 chaperone involved in the last steps of mitochondrial Complex III assembly in human cells. Biochim Biophys Acta. 2013. Dallabona C. et al. LYRM7 mutations cause a multifocal cavitating leukoencephalopathy with distinct MRI appearance. Brain. 2016. Hempel M. et al. LYRM7 - associated complex III deficiency: A clinical, molecular genetic, MR tomographic, and biochemical study. Mitochondrion. 2017. Cherian A. et al. Multifocal cavitating leukodystrophy-A distinct image in mitochondrial LYRM7 mutations. Mult Scler Relat Disord. 2021. Peruzzo R et al. Exploiting pyocyanin to treat mitochondrial disease due to respiratory complex III dysfunction. Nat Commun. 2021. |